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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs663674 chr11:77592522 A/G INTS4L1 chr7:64601603-64694600:+ 0.58 9.64 3.16E-20 Box Plot
THCA rs66462181 chr6:27091661 T/C RNF5P1 chr8:38458179-38458718:- 0.78 6.75 4.33E-11 Box Plot
THCA rs66462181 chr6:27091661 T/C ZFP57 chr6:29640169-29648887:- 0.81 7.37 7.48E-13 Box Plot
THCA rs66488313 chr6:26631568 G/T ZFP57 chr6:29640169-29648887:- 0.93 7.82 3.48E-14 Box Plot
THCA rs664957 chr17:18287839 T/C LOC162632 chr17:16614993-16707819:+ -0.46 -8.02 8.27E-15 Box Plot
THCA rs6657994 chr1:109185859 T/C NKIRAS1 chr3:23933151-23988082:- -0.42 -5.9 6.96E-9 Box Plot
THCA rs6660154 chr1:237759439 A/G ATP5I chr4:666225-668127:- 0.42 6.88 1.86E-11 Box Plot
THCA rs6660154 chr1:237759439 A/G CCDC72 chr3:48481686-48485537:+ 0.43 6.54 1.6E-10 Box Plot
THCA rs666165 chr11:48457439 C/T FOLH1B chr11:89372395-89431886:+ -0.41 -6.11 2.06E-9 Box Plot
THCA rs6662757 chr1:80533791 T/A PAX2 chr10:102495360-102589698:+ -0.38 -6.46 2.61E-10 Box Plot
THCA rs66632517 chr14:39863563 CTCTT/C LOC647288 chr13:75811890-75814517:- -0.5 -9.12 2.05E-18 Box Plot
THCA rs66665966 chr2:132271199 T/C CCDC74B chr2:130896860-130902707:- 0.41 7.37 7.57E-13 Box Plot
THCA rs66668469 chr2:132254001 A/G CCDC74B chr2:130896860-130902707:- 0.41 7.34 9.27E-13 Box Plot
THCA rs66673964 chr8:10125892 ACT/A SGK223 chr8:8175258-8244008:- 0.36 5.88 7.83E-9 Box Plot
THCA rs6669978 chr1:26534132 C/T GLRX chr5:95087023-95158709:- 0.32 6.02 3.47E-9 Box Plot